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Table 2 Main characteristics of the selected tagging SNPs in HPS4

From: Association of the Hermansky–Pudlak syndrome type 4 (HPS4) gene variants with cognitive function in patients with schizophrenia and healthy subjects

No. SNP (major/minor allele) Localization (Residue Change)   HWE P-value MAF
1 rs4822724 (A/G) 5′-flanking region Cases 0.0139 0.488
    Controls 0.2472 0.485
2 rs612768431 (Del/Ins) 5′-flanking region Cases 0.3959 0.133
    Controls 1.0000 0.121
3 rs9608491 (T/C) intron 4 Cases 1.0000 0.179
    Controls 0.0569 0.188
4 rs713998 (G/A) exon 9 (p.G229E) Cases 0.1517 0.233
    Controls 0.8529 0.225
5 rs2014410 (C/G) exon 11 (p.L443V) Cases 0.1900 0.271
    Controls 0.0014 0.285
  1. 121-base deletion/insertion (Del/Ins) polymorphism.
  2. HWE: Hardy–Weinberg equilibrium test.
  3. MAF: minor allele frequency.