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Table 1 Description of the 6 best SNP for remission (A) and response (B) in both the analyzed samples

From: Genome-wide association study of antidepressant response: involvement of the inorganic cation transmembrane transporter activity pathway

    Korean sample STAR*D
SNP Chromosome base pair Gene MAF Odds ratio Statistics p MAF Odds ratio Statistics p
A           
rs9315310 13 NBEA (165 Kbp) 0.28 3.67 3.1.32 <0.00001 0.21 1.21 2.112 0.034700
35351431
rs672170 6 RGS17 0.45 3.48 3.130 0.001748 0.36 1.18 2.155 0.031140
153345185
rs2532560 12 PARP11 (179 Kbp) 0.14 0.16 −3.079 0.002075 0.20 1.20 2.002 0.045270
4161871
rs2831440 21 N6ATM1 (800 Kbp) 0.39 3.53 3.045 0.002327 0.32 0.79 −3.126 0.001774
29428098
rs766127 6 RGS17 |MTRF1L |FBXO5 0.42 2.89 2.954 0.003134 0.30 1.21 2.374 0.017580
153313832
rs4737771 8 CRH (100 Kbp) 0.20 0.24 −2.943 0.003246 0.12 1.26 2.005 0.044920
67192379
B           
rs49411 3 FHIT 0.50 0.36 −3.292 0.0009939 0.49 0.85 −2.277 0.022760
59757575
rs10997242 10 CTNNA3 0.29 0.32 −3.025 0.0024890 0.16 1.30 2.788 0.005303
68336295
rs16873129 7 RAPGEF5 0.17 0.32 −2.912 0.0035970 0.07 1.32 2.103 0.035470
22145084
rs2299267 7 PON2 0.39 0.46 −2.858 0.0042650 0.17 1.26 2.486 0.012930
95061921
rs2112460 19 CACNA1A 0.21 2.84 2.759 0.0057920 0.48 1.19 2.497 0.012530
13590412
rs521093 1 EPS8L3 (62 Kbp) 0.10 5.13 2.728 0.0063760 0.20 1.21 2.096 0.036040
110368230
  1. When a SNP is localized in an intergenic region, the nearest gene is reported with distance in parenthesis
  2. MAF minor allele frequency