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Table 3 Results pertaining to the only molecular pathway that was replicated in both samples (N tot. molecular pathways = 7) for the response phenotype

From: Genome-wide association study of antidepressant response: involvement of the inorganic cation transmembrane transporter activity pathway

   Korean sample STAR*D
GO ID Pathway name SNPs with p < 0.05 SNPs (tot N) Permuted p SNPs with p < 0.05 SNPs (tot N) Permuted p
   True False / True False /
GO:0022890 Inorganic cation transmembrane transporter activity 478 (6 %) 7053 (93 %) 7531 2.9e-5 123 (8 %) 1317 (91 %) 1440 0.001
  1. True/False are referred to the number (and percentage) of SNPs showing association with p < 0.05 in the considered subset. The expected number (due to chance) of N true corresponds to 5 % of the total
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BMC Psychiatry

ISSN: 1471-244X

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