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Table 4 Target genes regulated indirectly by the two differentially expressed circRNAs through miRNAs

From: Abnormal expression of rno_circRNA_014900 and rno_circRNA_005442 induced by ketamine in the rat hippocampus

circRNA

Sponged miRNAs

Gene Symbol

Gene Description

rno_circRNA_014900

rno-miR-193a-5p

rno-miR-1224

Nova1

neuro-oncological ventral antigen 1

rno-miR-193a-5p

rno-miR-6332

Clasp1

cytoplasmic linker associated protein 1

miR-193a-5p

rno-miR-466b-5p

Rgs4, Mixl1

regulator of G-protein signaling 4; Mix paired-like homeobox 1

rno-miR-466b-5p

rno-miR-6332

Usp37, RGD1566029, Zfp91, Zmiz1, Pbx1

ubiquitin specific peptidase 37; similar to mKIAA1644 protein; zinc finger protein 91; zinc finger, MIZ-type containing 1; pre-B-cell leukemia homeobox 1

rno-miR-466b-5p

rno-miR-1224

Calcoco1

calcium binding and coiled coil domain 1

rno-miR-466b-5p

rno-miR-6321

Brwd3, Nfat5, Cnot7, Camta1

bromodomain and WD repeat domain containing 3; nuclear factor of activated T-cells 5, tonicity-responsive; CCR4-NOT transcription complex, subunit 7; calmodulin binding transcription activator 1

rno-miR-6332

rno-miR-1224

Prpf4b, Hgs, Gtdc1, Dgkk

pre-mRNA processing factor 4B;hepatocyte growth factor-regulated tyrosine kinase substrate; glycosyltransferase-like domain containing 1;diacylglycerol kinase kappa

rno-miR-6332

rno-miR-6321

RGD1562037, Usp24,Ssbp2

similar to OTTHUMP00000046255; ubiquitin specific peptidase 24; single-stranded DNA binding protein 2

rno-miR-6332

rno-miR-6321

rno-miR-466b-5p

Ssbp2, RGD1562037

singe-stranded DNA binding protein 2; similar to OTTHUMP00000046255

rno-miR-6332

rno-miR-466b-5p rno-miR-1224

Zfp91

zinc finger protein 91

rno_circRNA_005442

rno-miR-107-5p

rno-miR-323-5p

Eps8,Rhot1

epidermal growth factor receptor pathway substrate 8, ras homolog gene family, member T1

rno-miR-107-5p

rno-miR-344b-5p

Hn1

hematological and neurological expressed 1

rno-miR-107-5p

rno-miR-135b-5p

Ptk2,Tiam1

protein tyrosine kinase 2;T-cell lymphoma invasion and metastasis 1

rno-miR-107-5p

rno-miR-135a(b)-5p

Slc8a1,Man2a1,Tnpo1,Rgl1

solute carrier family 8 (sodium/calcium exchanger), member 1; mannosidase, alpha, class 2A, member 1;transportin 1; ral guanine nucleotide dissociation stimulator,-like 1

rno-miR-323-5p

rno-miR-344b-5p

Tomm6

translocase of outer mitochondrial membrane 6 homolog (yeast)

rno-miR-323-5p

miR-135a(b)-5p

Shisa7

shisa family member 7

rno-miR-344b-5p

miR-135a(b)-5p

Arel1

apoptosis resistant E3 ubiquitin protein ligase 1

rno-miR-323-5p

rno-miR-107-5p

rno-miR-135a(b)-5p

Rhot1

ras homolog gene family, member T1