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Table 3 Mapping of BeCOME assessments onto RDoC

From: The biological classification of mental disorders (BeCOME) study: a protocol for an observational deep-phenotyping study for the identification of biological subtypes

RDoC Domain

RDoC Constructs

Genes

Mole-cules

Cells

Circuitsa

Physiology

Behavior

Self-Report

Paradigms/Tasks

NegativeValence

Acute threat (“fear”)

Genome- and systemwide OMICS assessments (blood draws):

- DNA, polygenic risk scores

- Epigenetic markers (e.g. DNA methylation, non-coding RNAs, histone modifications

- Gene expression

- Proteomics and Metabolomics

- Peripheral blood mononuclear cells (PBMC), induced pluripotent stem cells (IPSC)

- In vitro dexamethasone stimulation of cells

Autonomic nervous system, amygdala, hippocampus, central nucleus, dmPFC (pl), dorsal ACC, dPAG, hypothalamus, ICMs, insular cortex, latPFC/insula, LC, OFC, PAG, pons, rostral/vent ACC

Blood pressure, heart rate, startle EMG, pupillometry, skin conductance

Estimation of the probability of aversive event (electrical shock), number of mistakes on mental arithmetic task

Symptomatic assessment of phobias (M-CID/DIAX)

Fear conditioning and extinctionb, imaging stress testc

Potential threat (“anxiety”)

Bed nucleus of stria terminalis

Potentiated startle, average cortisol levels

 

Intolerance of Uncertainty Scale, Behavioral Inhibition Scale (BIS), Body Sensation Questionnaire (BSQ), Agoraphobic Cognitions Questionnaire (ACQ)

Startling noise presentationb

Sustained threat

Attention/vigilance network, dysregulation of amygdala/cingulate reactivity, habit systems (Striatum/ caudate/accumbens), hypothalamic nuclei, PVT

Dysregulated HPA axis

Anhedonia measures, decreased appetitive behavior (MADRS item No. 5), memory retrieval deficits (episodic memory task)

Childhood trauma Questionnaire (CTQ), KIFTL = modified version of the early trauma inventory, section N of M-CIDI/DIAX

Episodic memory taskd

Loss

Amygdala, default mode network, dorsolateral prefrontal cortex, habit systems (Striatum/ caudate/ accumbens), hippocampus, insula, orbitofrontal/parietal cortex, posterior cingulate gyrus, PVN, reward circuitry, vmPFC

ANS, HPA axis, neuroimmune, prolonged psycho-physiological reactivity,

Sadness (MADRS item No. 1)

Guilt (MADRS item No. 9), executive function, attentional bias to negative valenced information (identification of emotional face expression, response time)

Loss events questionnaire, Munich Event List

 

Frustrative nonreward

Amygdala, hypothalamus, LC, OFC, PAC, parasympathetic system, septum, striatum

 

Aggressive behaviors (can be derived from personality measures)

  

Positive Valence

Reward responsiveness

Anterior insula, dorsal ACC, lateral hypothalamus. Medial OFC, nucleus accumbens, vental pallidum, ventromedial PFC, VTA

Pupillometry, heart rate

Response time, decision-making in social Bayes task

Behavioral inhibition system, Behavioral approach system (BIS/BAS)

Reward anticipation taskc (= monetary incentive delay task), time estimation taskc (= simple guessing task)

Reward learning

Amygdala, basal ganglia, dorsal ACC, lateral habenula, orbitofrontal cortex rostral medial tegmentum, substantia nigra/VTA, ventral striatum

Cortical slow waves, heart rate change, skin conductance

  

Probabilistic social reward learning task

Cognitive Systems

Attention

Basal forebrain limbic system, dorsal/ventral attention network

 

Processing speed, number of mistakes

 

d2-Rd, trail making testd

Declarative memory

Hippocampal circuitry, PFC and PPC interactions with multiple association cortices

 

Short and delayed recall

 

Episodic memory taskd

Cognitive control

Frontopolar/anterior LPFC (BA10), Inhibition of DMN, dorsolateral prefrontal cortex, posterior parietal cortex, VLPFC

 

Response time, sensitivity to interference, inhibition

 

Stroopd

Working memory

Dorsal parietal, dorsolateral prefrontal cortex, inferior parietal cortex, PFC-parietal-cingulate-dorsal thalamus-dorsal striatum, MD, VA thalamus, VLPFC

Pupillometry, heart rate

Number of mistakes

 

Verbal N-backc, 2-backd

Arousal and Regulatory Systems

Arousal

Basal forebrain nuclei to cortical circuits, cholinergic and monoaminergic nuclei projections to thalamic and cortical, Cortical circuits such as fronto-insular and dorsal anterior cingulate etc.

Heart rate, pupil size, blood pressure, pulse, reduced habituation in standard psychophysiological measures (startel respone, skin conductance), HPA axis

Startle response

Subjective ratings during stress test

Imaging stress testc, Fear conditioning/extinctionb, resting state fMRI, Heart rate variability (mini-ECG), pupillometry, electrodermal activity

Circadian rhythms

Sleep-wakefulness

 

Pulse, heart rate

Circadian rest/activity rhythms in the real world, motor behaviors during sleep

Subjective daily sleep logs during actigraphy

Actigraphy, Mini-ECG, sleep-dependent memory consolidation (fear extinction)b

Social Processes

Affiliation and attachment

Amygdala, BNST, FF gyrus, Nacc, OFC, PVN, VMPFC

Immune markers, activation of sympathetic activity, HPA axis

 

Attachment style (RSQ)

Social anhedonia (ACIPS)

 

Social communication

Amygdala

 

Identification of emotions

Size of social network (SNQ)

Emotional Faces Taskc

Perception and understanding of self

Left inferior frontal cortex, posterior cingulate/precuneus, MPFC

 

Evidence that one understands ownership of one’s own body parts or action (thoughts/behaviors), hallucinations

Locus of control (IE-4, attributional style questionnaire), psychotic section of M-CIDI

 

Perception and understanding of others

MPFC, precuneus, superior temporal sulcus, temporal pole, TPJ

  

Emotional/autism quotient (EQ/AQ)

Emotional Faces Taskc

  1. aas listed in the RDoC matrix; btask performed during psychophysiological measurements; ctask performed during imaging measurements; dtask performed during neuropsychological measurements